Knowledge of the subcellular localization of proteins is essential to understand protein functions and networks. Here we developed a mass spectrometry and bioinformatics pipeline to generate a proteome wide resource of protein localization
(Orre et al., XX 2017). The resource contains localization data from five different cell lines, covering proteins mapping to 12 418 genes. The analysis classify proteins with high accuracy into cytosolic, nuclear, secretory and mitochondrial
locations and further into specific subcellular compartments. Proteome wide subcellular information provides a valuable data layer in analysis of protein complexes, domain and variant driven protein localization. Via this portal the
data published in Orre et al. is made available via several tools and for easy down load. Feel free to dive into subcellular proteome. To make most out of the resource we recommend to read the related publication, and please refer to
the original publication when using the data.